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LIST OF PUBLICATIONS
2021
Vigneron A., Cruaud P., Aubé J., Guyoneaud R. and Goni-Urriza M. (2021) Transcriptomic evidence for versatile metabolic activities of mercury cycling microorganisms in brackish microbial mats. npj Biofilms and Microbiomes [pdf]
Vigneron A., Cruaud P., Culley A. I., Couture R.-M., Lovejoy C. and Vincent W. F. (2021) Genomic evidence for sulfur intermediates as new biogeochemical hubs in a model aquatic microbial ecosystem. Microbiome [pdf]
Vigneron A., Cruaud P., Ducellier F., Head I. M. and Tsesmetzis N. (2021) Syntrophic hydrocarbon degradation in a decommissioned off-shore subsea oil storage structure. Microorganisms [pdf]
2022
Vigneron A., Cruaud P., Lovejoy, C. and Vincent W. F. (2022) Genomic evidence for functional diversity in DPANN Archaea ; from oxic species to anoxic vampiristic consortia. ISME Communications [pdf]
2020
Cruaud P., Vigneron A., Dorea C. C., Rodriguez M. J. & Charette S. J. (2020) Rapid Changes in Microbial Community Structures along a Meandering River. Microorganisms [pdf]
2019
Vigneron A., Cruaud P., Langlois V., Lovejoy C., Culley A. I. and Vincent W. F. (2019) Ultra-small and abundant : candidate phyla radiation bacteria are potential catalysts of carbon transformation in a thermokarst lake ecosystem. Limnology and Oceanography Letters [pdf]
Vigneron A., Cruaud P., Bhiry N., Lovejoy C. and Vincent W. F. (2019) Microbial community structure and methane cycling potential along a thermokarst pond-peatland continuum. Microorganisms [pdf]
Cruaud P., Vigneron A., Fradette M.-S., Dorea C.C., Culley A.I., Rodriguez M.J. and Charette S.J. (2019) Annual protist community dynamics in a freshwater ecosystem undergoing contrasted climatic conditions : the Saint-Charles River (Canada). Frontiers in Microbiology [pdf]
Vigneron A., Lovejoy C., Cruaud P., Kalenitchenko D. S. , Culley A. I. and Vincent W. F. (2019) Contrasting winter versus summer microbial communities and metabolic functions in a permafrost thaw lake. Frontiers
in Microbiology [pdf]
Cruaud, P., Decker, C., Olu, K., Arnaud-Haond, S., Papot, C., Le Baut, J., Vigneron A.; Khripounoff A., Gayet N., Cathalot C., Caprais J.-C., Pignet P., Godfroy A. and Cambon-Bonavita M.-A. (2019) Ecophysiological differences between vesicomyid species and metabolic capabilities of their symbionts influence distribution patterns of the deep-sea clams. Marine Ecology [pdf]
Cruaud, P., Vigneron, A., Fradette, M.-S., Dorea, C.C., Culley, A.I., Rodriguez, M.J., and Charette, S.J. (2019) Annual bacterial community cycle in a seasonally ice-covered river reflects environmental and climatic conditions. Limnology and Oceanography [pdf]
Vigneron, A., Alsop, E.B., Cruaud, P., Philibert, G., King, B., Baksmaty, L., Lavallée D., Lomans B. P., Eloe-Fadrosh E., Kyrpides N., Head I. and Tsesmetzis N. (2019) Contrasting Pathways for Anaerobic Methane Oxidation in Gulf of Mexico Cold Seep Sediments. mSystems [pdf]
2018
Vigneron, A., Cruaud, P., Mohit, V., Martineau, M.-J., Culley, A.I., Lovejoy, C., and Vincent, W.F. (2018) Multiple Strategies for Light-Harvesting, Photoprotection, and Carbon Flow in High Latitude Microbial Mats. Frontiers in Microbiology [pdf]
Vigneron, A., Cruaud, P., Alsop, E., de Rezende, J.R., Head, I.M., and Tsesmetzis, N. (2018) Beyond the tip of the iceberg; a new view of the diversity of sulfite-and sulfate-reducing microorganisms. The ISME Journal [pdf]
Haran, J., Delvare, G., Vayssieres, J.-F., Benoit, L., Cruaud, P., Rasplus, J.-Y., and Cruaud, A. (2018) Increasing the utility of barcode databases through high-throughput sequencing of amplicons from dried museum specimens, an example on parasitic hymenoptera (Braconidae). Biological Control [pdf]
2017
Cruaud, P., Vigneron, A., Pignet, P., Caprais, J.-C., Lesongeur, F., Toffin, L., Godfroy A. and Cambon-Bonavita M.-A. (2017) Comparative Study of Guaymas Basin Microbiomes: Cold Seeps vs. Hydrothermal Vents Sediments. Frontiers in Marine Science [pdf]
Vigneron, A., Alsop, E.B., Cruaud, P., Philibert, G., King, B., Baksmaty, L., Lavallée D., Lomans B. P., Kyrpides N. C., Head I. M. and Tsesmetzis N. (2017) Comparative metagenomics of hydrocarbon and methane seeps of the Gulf of Mexico. Scientific Reports [pdf]
Cruaud, P., Vigneron, A., Fradette, M.-S., Charette, S.J., Rodriguez, M.J., Dorea, C.C., and Culley, A.I. (2017) Open the SterivexTM casing: An easy and effective way to improve DNA extraction yields. Limnology and Oceanography: Methods [pdf]
Rabouille, C., Olu, K., Baudin, F., Khripounoff, A., Dennielou, B., Arnaud-Haond, S., Babonneau N., Bayle C., Beckler J., Bessette S., Bombled B., Bourgeois S., Brandily C., Caprais J.-C., Cathalot C., Charlier K., Corvaisier R., Croguennec C., Cruaud P., Decker C., Droz L., Gayet N., Godfroy A., Hourdez S., Le Bruchec J., et al. (2017) The Congolobe project, a multidisciplinary study of Congo deep-sea fan lobe complex: Overview of methods, strategies, observations and sampling. Deep Sea Research Part II : Topical Studies in Oceanography [pdf]
Cruaud, P., Rasplus, J.-Y., Rodriguez, L.J., and Cruaud, A. (2017) High-throughput sequencing of multiple amplicons for barcoding and integrative taxonomy. Scientific Reports [pdf]
2015
Portail, M., Olu, K., Escobar-Briones, E., Caprais, J.C., Menot, L., Waeles, M., Cruaud P., Sarradin P. M., Godfroy A. and Sarrazin J. (2015) Comparative study of vent and seep macrofaunal communities in the Guaymas Basin. Biogeosciences [pdf]
Cruaud, P., Vigneron, A., Pignet, P., Caprais, J.-C., Lesongeur, F., Toffin, L., Godfroy A., Cambon-Bonavita M.-A. (2015) Microbial communities associated with benthic faunal assemblages at cold seep sediments of the Sonora Margin, Guaymas Basin. Frontiers in Marine Science [pdf]
2014
Vigneron, A., Cruaud, P., Pignet, P., Caprais, J.-C., Gayet, N., Cambon-Bonavita, M.-A., Godfroy A. and Toffin L. (2014) Bacterial communities and syntrophic associations involved in anaerobic oxidation of methane process of the Sonora Margin cold seeps, Guaymas Basin. Environmental Microbiology [pdf]
Vigneron, A., Cruaud, P., Roussel, E.G., Pignet, P., Caprais, J.-C., Callac, N., Ciobanu M.-C., Godfroy A., Cragg B. A., Parkes J. R., Van Nostrand J. D., He Z., Zhou J. and Toffin L. (2014) Phylogenetic and Functional Diversity of Microbial Communities Associated with Subsurface Sediments of the Sonora Margin, Guaymas Basin. PLoS ONE [pdf]
Cruaud, P., Vigneron, A., Lucchetti-Miganeh, C., Ciron, P.E., Godfroy, A., and Cambon-Bonavita, M.-A. (2014) Influence of DNA Extraction Method, 16S rRNA Targeted Hypervariable Regions, and Sample Origin on Microbial Diversity Detected by 454 Pyrosequencing in Marine Chemosynthetic Ecosystems. Applied and Environmental Microbiology [pdf]
Cruaud P. (2014) Influence des communautés microbiennes sédimentaires sur la répartition faunistique dans les sites hydrothermaux et les zones d'émissions de fluides froids du Bassin de Guaymas [phD manuscript]
2013
Vigneron, A., Cruaud, P., Pignet, P., Caprais, J.-C., Cambon-Bonavita, M.-A., Godfroy, A., and Toffin, L. (2013) Archaeal and anaerobic methane oxidizer communities in the Sonora Margin cold seeps, Guaymas Basin (Gulf of California). The ISME Jounal [pdf]
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